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2024
Arzika AM, Abdou A, Maliki R, Beido N, Kadri B, Harouna AN, Galo AN, Alio MK, Lebas E, Oldenburg CE et al..  2024.  Prolonged mass azithromycin distributions and macrolide resistance determinants among preschool children in Niger: A sub-study of a cluster-randomized trial (MORDOR).. PLoS Med. 21(5):e1004386.
2023
Kaidonis G, Lamy R, Wu J, Yang D, Psaras C, Doan T, Stewart JM.  2023.  Aqueous Fluid Transcriptome Profiling Differentiates Between Non-Neovascular and Neovascular AMD.. Invest Ophthalmol Vis Sci. 64(10):26.
Nguyen MT, Mentreddy A, Schallhorn J, Chan M, Aung S, Doernberg SB, Babik J, Miles K, Yang K, Lydon E et al..  2023.  Isolated Ocular Mpox without Skin Lesions, United States.. Emerg Infect Dis. 29(6):1285-1288.
2022
Oldenburg CE, Hinterwirth A, Ourohiré M, Dah C, Ouédraogo M, Sie A, Boudo V, Chen C, Ruder K, Zhong L et al..  2022.  Gut Resistome after Antibiotics among Children with Uncomplicated Severe Acute Malnutrition: A Randomized Controlled Trial.. Am J Trop Med Hyg. 107(1):59-64.
Redd TK, Lalitha P, N Prajna V, Sikha M, Gunasekaran R, Hinterwirth A, Chen C, Zhong L, Liu Z, Lietman TM et al..  2022.  Impact of Sample Collection Order on the Diagnostic Performance of Metagenomic Deep Sequencing for Infectious Keratitis.. Cornea. 41(1):39-44.
Mahmud H, Keenan JD, Gonzales J, Schallhorn J, Chan M, Arnold B, Cavallino V, Lietman TM, Doan T, Seitzman GD.  2022.  Ocular Rosacea microBiome Study (ORBS)-sub-microbial versus antibiotic dosing of doxycycline versus placebo in treatment of symptomatic ocular rosacea: study protocol for a parallel-arm randomized clinical trial.. Trials. 23(1):1033.
2021
O'Brien KS, Arzika AM, Amza A, Maliki R, Ousmane S, Kadri B, Nassirou B, Mankara AKaramba, Harouna ANaser, Colby E et al..  2021.  Age-based targeting of biannual azithromycin distribution for child survival in Niger: an adaptive cluster-randomized trial protocol (AVENIR).. BMC Public Health. 21(1):822.
2020
Oldenburg CE, Doan T.  2020.  Azithromycin for severe COVID-19.. Lancet. 396(10256):936-937.
Digitale J, Sie A, Coulibaly B, Ouermi L, Dah C, Tapsoba C, Bärnighausen T, Lebas E, Arzika AM, Glymour MMaria et al..  2020.  Gut Bacterial Diversity and Growth among Preschool Children in Burkina Faso.. Am J Trop Med Hyg. 103(6):2568-2573.
Oldenburg CE, Hinterwirth A, Sie A, Coulibaly B, Ouermi L, Dah C, Tapsoba C, Cummings SL, Zhong L, Chen C et al..  2020.  Gut Resistome After Oral Antibiotics in Preschool Children in Burkina Faso: A Randomized, Controlled Trial.. Clin Infect Dis. 70(3):525-527.
Doan T, Worden L, Hinterwirth A, Arzika AM, Maliki R, Abdou A, Zhong L, Chen C, Cook C, Lebas E et al..  2020.  Macrolide and Nonmacrolide Resistance with Mass Azithromycin Distribution.. N Engl J Med. 383(20):1941-1950.
Seitzman GD, Doan T.  2020.  No Time for Tears.. Ophthalmology. 127(7):980-981.
Doan T, Hinterwirth A, Worden L, Arzika AM, Maliki R, Chen C, Zhong L, Zhou Z, Acharya NR, Porco TC et al..  2020.  Post-antibiotic Ocular Surface Microbiome in Children: A Cluster-Randomized Trial.. Ophthalmology. 127(8):1127-1130.
Hinterwirth A, Sie A, Coulibaly B, Ouermi L, Dah C, Tapsoba C, Zhong L, Chen C, Lietman TM, Keenan JD et al..  2020.  Rapid Reduction of Species in the Gut Microbiome of Preschool Children after Oral Azithromycin: A Randomized Controlled Trial.. Am J Trop Med Hyg. 103(3):1266-1269.
Doan T, Hinterwirth A, Arzika AM, Worden L, Chen C, Zhong L, Oldenburg CE, Keenan JD, Lietman TM.  2020.  Reduction of Coronavirus Burden With Mass Azithromycin Distribution.. Clin Infect Dis. 71(16):2282-2284.
Oldenburg CE, Doan T.  2020.  Rigorous Randomized Controlled Trial Implementation in the Era of COVID-19.. Am J Trop Med Hyg. 102(6):1154-1155.
2019
Berlinberg EJ, Gonzales JA, Doan T, Acharya NR.  2019.  Association Between Noninfectious Uveitis and Psychological Stress.. JAMA Ophthalmol. 137(2):199-205.
Gonzales JA, Hinterwirth A, Shantha J, Wang K, Zhong L, Cummings SL, Qian Y, Wilson MR, Acharya NR, Doan T.  2019.  Association of Ocular Inflammation and Rubella Virus Persistence.. JAMA Ophthalmol. 137(4):435-438.
Seitzman GD, Thulasi P, Hinterwirth A, Chen C, Shantha J, Doan T.  2019.  Capnocytophaga Keratitis: Clinical Presentation and Use of Metagenomic Deep Sequencing for Diagnosis.. Cornea. 38(2):246-248.
Takhar JS, Joye AS, Somkijrungroj T, Laovirojjanakul W, Lin C-P, Lietman TM, Porco TC, Keenan JD, Gebreegziabher EA, Seitzman GD et al..  2019.  A double masked randomised 4-week, placebo-controlled study in the USA, Thailand and Taiwan to compare the efficacy of oral valganciclovir and topical 2% ganciclovir in the treatment of cytomegalovirus anterior uveitis: study protocol.. BMJ Open. 9(12):e033175.
Sie A, Ouattara M, Bountogo M, Bagagnan C, Coulibaly B, Boudo V, Lebas E, Brogdon JM, Lin Y, Bärnighausen T et al..  2019.  A double-masked placebo-controlled trial of azithromycin to prevent child mortality in Burkina Faso, West Africa: Community Health with Azithromycin Trial (CHAT) study protocol.. Trials. 20(1):675.
Gomez CA, Sahoo MK, Kahn GYasmeen, Zhong L, Montoya JG, Pinsky BA, Doan T.  2019.  Dual-target, real-time PCR for the diagnosis of intraocular infections.. Br J Ophthalmol. 103(4):569-572.
Rathinam SR, Gonzales JA, Thundikandy R, Kanakath A, S Murugan B, Vedhanayaki R, Lim LL, Suhler EB, Al-Dhibi HA, Doan T et al..  2019.  Effect of Corticosteroid-Sparing Treatment With Mycophenolate Mofetil vs Methotrexate on Inflammation in Patients With Uveitis: A Randomized Clinical Trial.. JAMA. 322(10):936-945.
Ray KJ, Cotter SY, Arzika AM, Kim J, Boubacar N, Zhou Z, Zhong L, Porco TC, Keenan JD, Lietman TM et al..  2019.  High-throughput sequencing of pooled samples to determine community-level microbiome diversity.. Ann Epidemiol. 39:63-68.
Ung L, Acharya NR, Agarwal T, Alfonso EC, Bagga B, Bispo PJm, Burton MJ, Dart JKg, Doan T, Fleiszig SMj et al..  2019.  Infectious corneal ulceration: a proposal for neglected tropical disease status.. Bull World Health Organ. 97(12):854-856.
Keenan JD, Arzika AM, Maliki R, Boubacar N, Adamou SElh, Ali MMoussa, Cook C, Lebas E, Lin Y, Ray KJ et al..  2019.  Longer-Term Assessment of Azithromycin for Reducing Childhood Mortality in Africa.. N Engl J Med. 380(23):2207-2214.
Doan T, Arzika AM, Hinterwirth A, Maliki R, Zhong L, Cummings S, Sarkar S, Chen C, Porco TC, Keenan JD et al..  2019.  Macrolide Resistance in MORDOR I - A Cluster-Randomized Trial in Niger.. N Engl J Med. 380(23):2271-2273.
Seitzman GD, Hinterwirth A, Zhong L, Cummings S, Chen C, Driver TH, Lee MD, Doan T.  2019.  Metagenomic Deep Sequencing for the Diagnosis of Corneal and External Disease Infections.. Ophthalmology. 126(12):1724-1726.
Carpenter ML, Tan SK, Watson T, Bacher R, Nagesh V, Watts A, Bentley G, Weber J, Huang CH, Sahoo MK et al..  2019.  Metagenomic Next-Generation Sequencing for Identification and Quantitation of Transplant-Related DNA Viruses.. J Clin Microbiol. 57(12)
Sie A, Bountogo M, Nebie E, Ouattara M, Coulibaly B, Bagagnan C, Zabre P, Lebas E, Brogdon J, Godwin WW et al..  2019.  Neonatal azithromycin administration to prevent infant mortality: study protocol for a randomised controlled trial.. BMJ Open. 9(9):e031162.
Takhar JS, Doan TA, Gonzales JA.  2019.  Primary vitreoretinal lymphoma: empowering our clinical suspicion.. Curr Opin Ophthalmol. 30(6):491-499.
Niemeyer KM, Gonzales JA, Doan T, Browne EN, Rao MM, Acharya NR.  2019.  Time Trade-off Utility Values in Noninfectious Uveitis.. Am J Ophthalmol. 208:47-55.
Lalitha P, Seitzman GD, Kotecha R, Hinterwirth A, Chen C, Zhong L, Cummings S, Lebas E, Sahoo MK, Pinsky BA et al..  2019.  Unbiased Pathogen Detection and Host Gene Profiling for Conjunctivitis.. Ophthalmology. 126(8):1090-1094.
Takhar JS, Pawar VK, Marneris AG, Doan TA, Acharya NR, Gonzales JA.  2019.  When to Consider Bisphosphonates in Patients on Steroids for Chronic Ocular Inflammatory Conditions.. J Ocul Pharmacol Ther. 35(7):379-380.
2018
Keenan JD, Bailey RL, West SK, Arzika AM, Hart J, Weaver J, Kalua K, Mrango Z, Ray KJ, Cook C et al..  2018.  Azithromycin to Reduce Childhood Mortality in Sub-Saharan Africa.. N Engl J Med. 378(17):1583-1592.
Moussa K, Doan T, Stewart JM, Shantha J, Gonzales J, Acharya N, Cunningham ET.  2018.  CYTOMEGALOVIRUS RETINITIS ASSOCIATED WITH OCCLUSIVE VASCULOPATHY IN AN ELDERLY, HUMAN IMMUNODEFICIENCY VIRUS-NEGATIVE MAN.. Retin Cases Brief Rep. 12 Suppl 1:S114-S117.
Chin SA, Morberg DP, Alemayehu W, Melese M, Lakew T, Chen MC, Zhou Z, Doan T, Cevallos V, Lietman TM et al..  2018.  Diversity of Chlamydia trachomatis in Trachoma-Hyperendemic Communities Treated With Azithromycin.. Am J Epidemiol. 187(9):1840-1845.
Gonzales J, Doan T, Shantha JG, Bloomer M, Wilson MR, DeRisi JL, Acharya N.  2018.  Metagenomic deep sequencing of aqueous fluid detects intraocular lymphomas.. Br J Ophthalmol. 102(1):6-8.
2017
Doan T, Arzika AM, Ray KJ, Cotter SY, Kim J, Maliki R, Zhong L, Zhou Z, Porco TC, Vanderschelden B et al..  2017.  Gut Microbial Diversity in Antibiotic-Naive Children After Systemic Antibiotic Exposure: A Randomized Controlled Trial.. Clin Infect Dis. 64(9):1147-1153.
Doan T, Acharya NR, Pinsky BA, Sahoo MK, Chow ED, Banaei N, Budvytiene I, Cevallos V, Zhong L, Zhou Z et al..  2017.  Metagenomic DNA Sequencing for the Diagnosis of Intraocular Infections.. Ophthalmology. 124(8):1247-1248.
2016
Doan T, Pinsky BA.  2016.  Current and future molecular diagnostics for ocular infectious diseases.. Curr Opin Ophthalmol. 27(6):561-567.
Doan T, Wilson MR, Crawford ED, Chow ED, Khan LM, Knopp KA, O'Donovan BD, Xia D, Hacker JK, Stewart JM et al..  2016.  Illuminating uveitis: metagenomic deep sequencing identifies common and rare pathogens.. Genome Med. 8(1):90.
Doan T, Akileswaran L, Andersen D, Johnson B, Ko N, Shrestha A, Shestopalov V, Lee CS, Lee AY, Van Gelder RN.  2016.  Paucibacterial Microbiome and Resident DNA Virome of the Healthy Conjunctiva.. Invest Ophthalmol Vis Sci. 57(13):5116-5126.
2014
Doan T, Vemulakonda GA, Choi D, C Keene D, Akileswaran L, Van Gelder RN, Chao JR.  2014.  Retinal neovascularization and endogenous fungal endophthalmitis in intravenous drug users.. Ophthalmology. 121(9):1847-8.e2.
Doan T, Chao JR.  2014.  A woman with bilateral maculopathy and acquired vitamin B12 deficiency.. Eye (Lond). 28(7):905-6.