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2024

Doan T, Liu Z, Sie A, Dah C, Bountogo M, Ouattara M, Coulibaly B, Kiemde D, Zonou G, Nebie E et al.. 2024. Gut Microbiome Diversity and Antimicrobial Resistance After a Single Dose of Oral Azithromycin in Children: A Randomized Placebo-Controlled Trial.. Am J Trop Med Hyg.

Oldenburg CE, Ouattara M, Bountogo M, Boudo V, Ouedraogo T, Compaoré G, Dah C, Zakane A, Coulibaly B, Bagagnan C et al.. 2024. Mass Azithromycin Distribution to Prevent Child Mortality in Burkina Faso: The CHAT Randomized Clinical Trial.. JAMA. 331(6):482-490.

Deiner MS, Deiner NA, Hristidis V, McLeod SD, Doan T, Lietman TM, Porco TC. 2024. Use of Large Language Models to Assess the Likelihood of Epidemics From the Content of Tweets: Infodemiology Study.. J Med Internet Res. 26:e49139.

2023

Amza A, Nassirou B, Kadri B, Ali S, Mariama B, Ibrahim CMamadou, Roufaye LAboubacar, Lebas E, Colby E, Zhong L et al.. 2023. Comprehensive Profile of Pathogens and Antimicrobial Resistance in Conjunctivitis Cases from Niger.. Am J Trop Med Hyg. 109(6):1333-1338.

Tsui E, Sella R, Tham V, Kong AW, McClean E, Goren L, Bahar I, Cherian N, Ramirez J, Hughes RE et al.. 2023. Pathogen Surveillance for Acute Infectious Conjunctivitis.. JAMA Ophthalmol.

Hazel A, Arzika AM, Abdou A, Lebas E, Porco TC, Maliki R, Doan T, Lietman TM, Keenan JD, Blumberg S. 2023. Temporal Trends in Phenotypic Macrolide and Nonmacrolide Resistance for Streptococcus pneumoniae Nasopharyngeal Samples Up to 36 Months after Mass Azithromycin Administration in a Cluster-Randomized Trial in Niger.. Am J Trop Med Hyg.

Ousmane S, Kollo IA, Jambou R, Boubacar R, Arzika AM, Maliki R, Amza A, Liu Z, Lebas E, Colby E et al.. 2023. Wastewater-Based Surveillance of Antimicrobial Resistance in Niger: An Exploratory Study.. Am J Trop Med Hyg.

2022

Mosenia A, Chin SA, Alemayehu W, Melese M, Lakew T, Zhou Z, Doan T, Cevallos V, Lietman TM, Keenan JD. 2022. Concordance of ompA types in children re-infected with ocular Chlamydia trachomatis following mass azithromycin treatment for trachoma.. PLoS Negl Trop Dis. 16(3):e0010237.

Bountogo M, Sie A, Coulibaly B, Ruder K, Chen C, Zhong L, Colby E, Lebas E, Deiner M, Hinterwirth A et al.. 2022. Deep sequencing analysis of acute conjunctivitis in Burkina Faso, Africa.. Int Health.

Lalitha P, N Prajna V, Gunasekaran R, Teja GVishnu, Sharma SS, Hinterwirth A, Ruder K, Zhong L, Chen C, Deiner M et al.. 2022. Deep sequencing analysis of clinical samples from patients with acute infectious conjunctivitis during the COVID-19 delta surge in Madurai, India.. J Clin Virol. 157:105318.

Arzika AM, Maliki R, E Goodhew B, Rogier E, Priest JW, Lebas E, O'Brien KS, Le V, Oldenburg CE, Doan T et al.. 2022. Effect of biannual azithromycin distribution on antibody responses to malaria, bacterial, and protozoan pathogens in Niger.. Nat Commun. 13(1):976.

Coulibaly B, Kiemde D, Zonou G, Sie A, Dah C, Bountogo M, Brogdon J, Hu H, Lebas E, Porco TC et al.. 2022. Effect of Single-dose Azithromycin on Pneumococcal Carriage and Resistance: A Randomized Controlled Trial.. Pediatr Infect Dis J. 41(9):728-730.

Redd TK, Lalitha P, N Prajna V, Sikha M, Gunasekaran R, Hinterwirth A, Chen C, Zhong L, Liu Z, Lietman TM et al.. 2022. Impact of Sample Collection Order on the Diagnostic Performance of Metagenomic Deep Sequencing for Infectious Keratitis.. Cornea. 41(1):39-44.

Oldenburg CE, Sie A, Bountogo M, Zakane A, Compaoré G, Ouedraogo T, Koueta F, Lebas E, Brogdon J, Nyatigo F et al.. 2022. Neonatal azithromycin administration for prevention of infant mortality.. NEJM Evid. 1(4):EVIDoa2100054.

Mahmud H, Keenan JD, Gonzales J, Schallhorn J, Chan M, Arnold B, Cavallino V, Lietman TM, Doan T, Seitzman GD. 2022. Ocular Rosacea microBiome Study (ORBS)-sub-microbial versus antibiotic dosing of doxycycline versus placebo in treatment of symptomatic ocular rosacea: study protocol for a parallel-arm randomized clinical trial.. Trials. 23(1):1033.

N Prajna V, Lalitha P, Teja GVishnu, Gunasekaran R, Sharma SS, Hinterwirth A, Ruder K, Zhong L, Chen C, Deiner M et al.. 2022. Outpatient human coronavirus associated conjunctivitis in India.. J Clin Virol. 157:105300.

2021

N Prajna V, Lalitha P, Chen C, Zhong L, Lietman TM, Doan T, Seitzman GD. 2021. Acute Keratoconjunctivitis Resulting From Coinfection With Avian Newcastle Virus and Human Adenovirus.. Cornea.

O'Brien KS, Arzika AM, Amza A, Maliki R, Ousmane S, Kadri B, Nassirou B, Mankara AKaramba, Harouna ANaser, Colby E et al.. 2021. Age-based targeting of biannual azithromycin distribution for child survival in Niger: an adaptive cluster-randomized trial protocol (AVENIR).. BMC Public Health. 21(1):822.

Coulibaly B, Sie A, Dah C, Bountogo M, Ouattara M, Compaoré A, Nikiema M, Tiansi JNankoné, Sibiri NDembélé, Brogdon JM et al.. 2021. Effect of a single dose of oral azithromycin on malaria parasitaemia in children: a randomized controlled trial.. Malar J. 20(1):360.

Doan T, Gebre T, Ayele B, Zerihun M, Hinterwirth A, Zhong L, Chen C, Ruder K, Zhou Z, Emerson PM et al.. 2021. Effect of Azithromycin on the Ocular Surface Microbiome of Children in a High Prevalence Trachoma Area.. Cornea.

Oldenburg CE, Pinsky BA, Brogdon J, Chen C, Ruder K, Zhong L, Nyatigo F, Cook CA, Hinterwirth A, Lebas E et al.. 2021. Effect of Oral Azithromycin vs Placebo on COVID-19 Symptoms in Outpatients With SARS-CoV-2 Infection: A Randomized Clinical Trial.. JAMA.

Arzika AM, Maliki R, Abdou A, Mankara AK, Harouna AN, Cook C, Hinterwirth A, Worden L, Zhong L, Chen C et al.. 2021. Gut resistome of preschool children after prolonged mass azithromycin distribution: a cluster-randomized trial.. Clin Infect Dis.

Kaur G, Seitzman GD, Lietman TM, McLeod SD, Porco TC, Doan T, Deiner MS. 2021. Keeping an eye on pink eye: a global conjunctivitis outbreak expert survey.. Int Health.

Brogdon JM, Sie A, N Dah C, Ouermi L, Coulibaly B, Lebas E, Zhong L, Chen C, Lietman TM, Keenan JD et al.. 2021. Poultry Ownership and Genetic Antibiotic Resistance Determinants in the Gut of Preschool Children.. Am J Trop Med Hyg.

Sie A, Coulibaly B, Dah C, Bountogo M, Ouattara M, Compaoré G, Brogdon JM, Godwin WW, Lebas E, Doan T et al.. 2021. Single-dose azithromycin for child growth in Burkina Faso: a randomized controlled trial.. BMC Pediatr. 21(1):130.

2020

Sie A, Dah C, Bountogo M, Ouattara M, Nebie E, Coulibaly B, Brogdon JM, Godwin WW, Lebas E, Doan T et al.. 2020. Adverse Events and Clinic Visits following a Single Dose of Oral Azithromycin among Preschool Children: A Randomized Placebo-Controlled Trial.. Am J Trop Med Hyg.

Lalitha P, N Prajna V, Sikha M, Gunasekaran R, Hinterwirth A, Worden L, Chen C, Zhong L, Liu Z, Lietman TM et al.. 2020. Evaluation of Metagenomic Deep Sequencing as a Diagnostic Test for Infectious Keratitis.. Ophthalmology.

Oldenburg CE, Hinterwirth A, Sie A, Coulibaly B, Ouermi L, Dah C, Tapsoba C, Cummings SL, Zhong L, Chen C et al.. 2020. Gut Resistome After Oral Antibiotics in Preschool Children in Burkina Faso: A Randomized, Controlled Trial.. Clin Infect Dis. 70(3):525-527.

Oldenburg CE, Hinterwirth A, Worden L, Sie A, Dah C, Ouermi L, Coulibaly B, Zhong L, Chen C, Ruder K et al.. 2020. Indirect effect of oral azithromycin on the gut resistome of untreated children: a randomized controlled trial.. Int Health.

Doan T, Worden L, Hinterwirth A, Arzika AM, Maliki R, Abdou A, Zhong L, Chen C, Cook C, Lebas E et al.. 2020. Macrolide and Nonmacrolide Resistance with Mass Azithromycin Distribution.. N Engl J Med. 383(20):1941-1950.

Doan T, Hinterwirth A, Worden L, Arzika AM, Maliki R, Chen C, Zhong L, Zhou Z, Acharya NR, Porco TC et al.. 2020. Post-antibiotic Ocular Surface Microbiome in Children: A Cluster-Randomized Trial.. Ophthalmology. 127(8):1127-1130.

Hinterwirth A, Sie A, Coulibaly B, Ouermi L, Dah C, Tapsoba C, Zhong L, Chen C, Lietman TM, Keenan JD et al.. 2020. Rapid Reduction of Species in the Gut Microbiome of Preschool Children after Oral Azithromycin: A Randomized Controlled Trial.. Am J Trop Med Hyg. 103(3):1266-1269.

Doan T, Hinterwirth A, Arzika AM, Worden L, Chen C, Zhong L, Oldenburg CE, Keenan JD, Lietman TM. 2020. Reduction of Coronavirus Burden With Mass Azithromycin Distribution.. Clin Infect Dis. 71(16):2282-2284.

2019

Takhar JS, Joye AS, Somkijrungroj T, Laovirojjanakul W, Lin C-P, Lietman TM, Porco TC, Keenan JD, Gebreegziabher EA, Seitzman GD et al.. 2019. A double masked randomised 4-week, placebo-controlled study in the USA, Thailand and Taiwan to compare the efficacy of oral valganciclovir and topical 2% ganciclovir in the treatment of cytomegalovirus anterior uveitis: study protocol.. BMJ Open. 9(12):e033175.

Sie A, Ouattara M, Bountogo M, Bagagnan C, Coulibaly B, Boudo V, Lebas E, Brogdon JM, Lin Y, Bärnighausen T et al.. 2019. A double-masked placebo-controlled trial of azithromycin to prevent child mortality in Burkina Faso, West Africa: Community Health with Azithromycin Trial (CHAT) study protocol.. Trials. 20(1):675.

Ray KJ, Cotter SY, Arzika AM, Kim J, Boubacar N, Zhou Z, Zhong L, Porco TC, Keenan JD, Lietman TM et al.. 2019. High-throughput sequencing of pooled samples to determine community-level microbiome diversity.. Ann Epidemiol. 39:63-68.

Oldenburg CE, Sie A, Coulibaly B, Ouermi L, Dah C, Tapsoba C, Bärnighausen T, Lebas E, Arzika AM, Cummings S et al.. 2019. Indirect Effect of Azithromycin Use on the Intestinal Microbiome Diversity of Untreated Children: A Randomized Trial.. Open Forum Infect Dis. 6(3):ofz061.

Ung L, Acharya NR, Agarwal T, Alfonso EC, Bagga B, Bispo PJm, Burton MJ, Dart JKg, Doan T, Fleiszig SMj et al.. 2019. Infectious corneal ulceration: a proposal for neglected tropical disease status.. Bull World Health Organ. 97(12):854-856.

Keenan JD, Arzika AM, Maliki R, Boubacar N, Adamou SElh, Ali MMoussa, Cook C, Lebas E, Lin Y, Ray KJ et al.. 2019. Longer-Term Assessment of Azithromycin for Reducing Childhood Mortality in Africa.. N Engl J Med. 380(23):2207-2214.

Lietman TM, Doan T, Keenan JD. 2019. Macrolide Resistance and Longer-Term Assessment of Azithromycin in MORDOR I. Reply.. N Engl J Med. 381(22):2184-2185.

Doan T, Arzika AM, Hinterwirth A, Maliki R, Zhong L, Cummings S, Sarkar S, Chen C, Porco TC, Keenan JD et al.. 2019. Macrolide Resistance in MORDOR I - A Cluster-Randomized Trial in Niger.. N Engl J Med. 380(23):2271-2273.

Sie A, Bountogo M, Nebie E, Ouattara M, Coulibaly B, Bagagnan C, Zabre P, Lebas E, Brogdon J, Godwin WW et al.. 2019. Neonatal azithromycin administration to prevent infant mortality: study protocol for a randomised controlled trial.. BMJ Open. 9(9):e031162.

Lalitha P, Seitzman GD, Kotecha R, Hinterwirth A, Chen C, Zhong L, Cummings S, Lebas E, Sahoo MK, Pinsky BA et al.. 2019. Unbiased Pathogen Detection and Host Gene Profiling for Conjunctivitis.. Ophthalmology. 126(8):1090-1094.

2018

Keenan JD, Bailey RL, West SK, Arzika AM, Hart J, Weaver J, Kalua K, Mrango Z, Ray KJ, Cook C et al.. 2018. Azithromycin to Reduce Childhood Mortality in Sub-Saharan Africa.. N Engl J Med. 378(17):1583-1592.

Chin SA, Morberg DP, Alemayehu W, Melese M, Lakew T, Chen MC, Zhou Z, Doan T, Cevallos V, Lietman TM et al.. 2018. Diversity of Chlamydia trachomatis in Trachoma-Hyperendemic Communities Treated With Azithromycin.. Am J Epidemiol. 187(9):1840-1845.

Oldenburg CE, Sie A, Coulibaly B, Ouermi L, Dah C, Tapsoba C, Bärnighausen T, Ray KJ, Zhong L, Cummings S et al.. 2018. Effect of Commonly Used Pediatric Antibiotics on Gut Microbial Diversity in Preschool Children in Burkina Faso: A Randomized Clinical Trial.. Open Forum Infect Dis. 5(11):ofy289.

Doan T, Hinterwirth A, Arzika AM, Cotter SY, Ray KJ, O'Brien KS, Zhong L, Chow ED, Zhou Z, Cummings SL et al.. 2018. Mass Azithromycin Distribution and Community Microbiome: A Cluster-Randomized Trial.. Open Forum Infect Dis. 5(8):ofy182.

2017

Doan T, Arzika AM, Ray KJ, Cotter SY, Kim J, Maliki R, Zhong L, Zhou Z, Porco TC, Vanderschelden B et al.. 2017. Gut Microbial Diversity in Antibiotic-Naive Children After Systemic Antibiotic Exposure: A Randomized Controlled Trial.. Clin Infect Dis. 64(9):1147-1153.

Doan T, Acharya NR, Pinsky BA, Sahoo MK, Chow ED, Banaei N, Budvytiene I, Cevallos V, Zhong L, Zhou Z et al.. 2017. Metagenomic DNA Sequencing for the Diagnosis of Intraocular Infections.. Ophthalmology. 124(8):1247-1248.